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Two New Spiny Species of Dianthus (Caryophyllaceae) from Turkey

Year 2018, Volume: 21 Issue: 4, 545 - 554, 31.08.2018

Ergin Hamzaoğlu , Murat Koç İlker Büyük

https://doi.org/10.18016/ksudobil.347445
Cited By: 1

Abstract

Some
Dianthus L. (Caryophyllaceae)
specimens which have spiny epicalyx scales and spiny leaves have been collected
from the Hanönü (Kastamonu) and the Mount Murat (Kütahya/Uşak). As a result of
the investigations, these specimens have been decided to be new species for the
scientific world and they have been named as Dianthus varankii Hamzaoğlu & Koç and Dianthus halisdemirii Hamzaoğlu & Koç. The descriptions,
ecological preferences, distribution information and conservation status of the
new species was given. Also, they were compared with closely related species, D. aculeatus Hamzaoğlu, based on its
general morphology and seed micromorphology. The relationships between new species
and their close relatives were determined based on the ITS sequences.

Keywords

Dianthus new taxa Turkey

References

  • Aras S, Duran A, Yenilmez G 2003. Isolation of DNA for RAPD analysis from dry leaf material of some Hesperis L. specimens. Plant Molecular Biology Reporter, 21(4): 461a-461f.
  • Boissier E 1867. Flora Orientalis, vol 1. H. Georg, Geneva & Basel, 479-516.
  • Bojňanský V, Fargašová A 2007. Atlas of seeds and fruits of Central and East-European Flora: The Carpathian Mountains Region. Springer, Netherlands, 47-91.
  • Chase MW, Soltis DE, Soltis PS, Rudall PJ, Fay MF, Hahn WH, Sullivan S, Joseph J, Molvray M, Kores PJ, Givnish TJ, Sytsma KJ, Pires JC 2000. Higher-level systematics of the monocotyledons: An assessment of current knowledge and a new classification. Pp. 3-16 in Monocots: Systematics and evolution, eds. K. L. Wilson and D. A. Morrison. Victoria: CSIRO Publishing.
  • Dequan L, Turland NJ 2001. Caryophyllaceae (Flora of China, vol 6. Science Press Beijing, and Missouri Botanical Garden Press, St. Louis: Ed. Jussieu AL) 102-107.
  • Ersöz M, Seçmen Ö 2009. Some of ecological features and relations with reproductive success in the populations of Dianthus erinaceus var. erinaceus endemic to Turkey. Biodicon, 2(3): 65-74.
  • Felsenstein J 1985. Confidence Limits on Phylogenies: An Approach using the Bootstrap. Evolution, 39(4): 783-791. Gardes M, Bruns TD 1993. ITS primers with enhanced specificity for Basidiomycetes - Application to the identification of mycorrhizae and rusts. Molecular Ecology, 2(2): 113-118.
  • Gemici Y, Leblebici E 1995. Seven new species for the Flora of Turkey. Candollea 50(1): 41-50.
  • Hamzaoğlu E, Koç M, Aksoy A 2014. A new pricking Carnation (Caryophyllaceae) grows on tuff from Turkey: Dianthus aculeatus sp. nov. Biodicon, 7(2): 159-162.
  • Hamzaoğlu E, Koç M 2015. Dianthus burdurensis (Caryophyllaceae), a new species from South-western Turkey. Phytotaxa 233(2): 196-200.
  • Hamzaoğlu E, Koç M, Büyük İ, Aksoy A, Soydam Aydın S 2015. A new serpentine-adapted carnation (Caryophyllaceae) from Turkey: Dianthus serpentinus sp. nov. Nord J Bot, 33(1): 57-63.
  • Hamzaoğlu E, Koç M, Büyük İ 2017. Dianthus ucarii (Caryophyllaceae): a new species from the northwest of Turkey. Turk J Bot 41(5): 486-492.
  • IUCN 2017. IUCN Red List Categories and Criteria, version 3.1, 2012. http://cmsdocs.s3.amazonaws.com/keydocuments/TranslatedVersions/2001redlistcats_crit_turkish.pdf. (Access date: 26.09.2017).
  • İlçim A, Behçet L, Mükemre M 2013. Dianthus vanensis (Caryophyllaceae), a new species from Turkey. Turk J Bot 37(2): 219-224.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Mentjies P, Drummond A 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28(12): 1647-1649.
  • Kimura M 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16(2): 111-120.
  • Kumar S, Stecher G, Tamura K 2016. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33(7): 1870-1874.
  • Popp M, Oxelman B 2001. Inferring the history of the polyploid Silene aegaea (Caryophyllaceae) using plastid and homoeologous nuclear DNA sequences. Molecular Phylogenetics and Evolution, 20(3): 474-481.
  • Popp M, Erixon P, Eggens F, Oxelman B 2005. Origin and Evolution of a Circumpolar Polyploid Species Complex in Silene (Caryophyllaceae) Inferred from Low Copy Nuclear RNA Polymerase Introns, rDNA, and Chloroplast DNA. Systematic Botany, 30(2): 302-313.
  • Reeve H 1967. Dianthus L. (Flora of Turkey and the East Aegean Islands, vol 2. Edinburgh University Press, Edinburgh: Ed. Davis PH) 99-131.
  • Rettig JH, Wilson HD, Manhart JR 1992. Phylogeny of the Caryophyllales - gene sequence data. Taxon, 41(2): 201-209.
  • Tamura K, Peterson D, Peterson N, Nei M, Kumar S 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28(10): 2731-2739.
  • Vural, C 2008. A new species of Dianthus (Caryophyllaceae) from mount Erciyes, Central Anatolia, Turkey. Botanical Journal of the Linnean Society 158(1): 55-61.
  • White TJ, Bruns T, Lee S, Taylor J 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Chapter 38. (PCR Protocols: A Guide to Methods and Applications, Academic Press, Orlando, Florida: Eds. Innis MD, Sninsky GJ, White T) 315-322.
  • Yılmaz O, Kaynak G, Daşkın R, Meriçlioğlu A 2011. Dianthus goekayi (Cary.ophyllaceae), a new species from Turkey. Annales Botanici Fennici, 48(1): 74-78.

Türkiye’den İki Yeni Dikenli Dianthus Türü (Caryophyllaceae)

Year 2018, Volume: 21 Issue: 4, 545 - 554, 31.08.2018

Ergin Hamzaoğlu , Murat Koç İlker Büyük

https://doi.org/10.18016/ksudobil.347445
Cited By: 1

Abstract

Hanönü
(Kastamonu) ve Murat Dağı’ndan (Kütahya/Uşak) epikaliks pulları ve yaprakları
dikenli olan bazı Dianthus L.
(Caryophyllaceae) örnekleri toplandı. Yapılan incelemeler sonucu bu örneklerin
bilim dünyası için yeni oldukları anlaşıldı ve bunlar Dianthus varankii Hamzaoğlu & Koç ve Dianthus halisdemirii Hamzaoğlu & Koç olarak adlandırıldı. Yeni
türlerin betimlemeleri, ekolojik tercihleri, yayılış bilgileri ve mevcut koruma
durumları verildi. Ayrıca, yakın akraba oldukları D. aculeatus Hamzaoğlu ile genel morfoloji ve tohum
mikromorfolojisi bakımından karşılaştırıldılar. Yeni türler ile yakın
akrabaları arasındaki moleküler benzerlikler ITS sekans analizine bağlı olarak
belirlendi.

Keywords

Dianthus yeni taksonlar Türkiye

References

  • Aras S, Duran A, Yenilmez G 2003. Isolation of DNA for RAPD analysis from dry leaf material of some Hesperis L. specimens. Plant Molecular Biology Reporter, 21(4): 461a-461f.
  • Boissier E 1867. Flora Orientalis, vol 1. H. Georg, Geneva & Basel, 479-516.
  • Bojňanský V, Fargašová A 2007. Atlas of seeds and fruits of Central and East-European Flora: The Carpathian Mountains Region. Springer, Netherlands, 47-91.
  • Chase MW, Soltis DE, Soltis PS, Rudall PJ, Fay MF, Hahn WH, Sullivan S, Joseph J, Molvray M, Kores PJ, Givnish TJ, Sytsma KJ, Pires JC 2000. Higher-level systematics of the monocotyledons: An assessment of current knowledge and a new classification. Pp. 3-16 in Monocots: Systematics and evolution, eds. K. L. Wilson and D. A. Morrison. Victoria: CSIRO Publishing.
  • Dequan L, Turland NJ 2001. Caryophyllaceae (Flora of China, vol 6. Science Press Beijing, and Missouri Botanical Garden Press, St. Louis: Ed. Jussieu AL) 102-107.
  • Ersöz M, Seçmen Ö 2009. Some of ecological features and relations with reproductive success in the populations of Dianthus erinaceus var. erinaceus endemic to Turkey. Biodicon, 2(3): 65-74.
  • Felsenstein J 1985. Confidence Limits on Phylogenies: An Approach using the Bootstrap. Evolution, 39(4): 783-791. Gardes M, Bruns TD 1993. ITS primers with enhanced specificity for Basidiomycetes - Application to the identification of mycorrhizae and rusts. Molecular Ecology, 2(2): 113-118.
  • Gemici Y, Leblebici E 1995. Seven new species for the Flora of Turkey. Candollea 50(1): 41-50.
  • Hamzaoğlu E, Koç M, Aksoy A 2014. A new pricking Carnation (Caryophyllaceae) grows on tuff from Turkey: Dianthus aculeatus sp. nov. Biodicon, 7(2): 159-162.
  • Hamzaoğlu E, Koç M 2015. Dianthus burdurensis (Caryophyllaceae), a new species from South-western Turkey. Phytotaxa 233(2): 196-200.
  • Hamzaoğlu E, Koç M, Büyük İ, Aksoy A, Soydam Aydın S 2015. A new serpentine-adapted carnation (Caryophyllaceae) from Turkey: Dianthus serpentinus sp. nov. Nord J Bot, 33(1): 57-63.
  • Hamzaoğlu E, Koç M, Büyük İ 2017. Dianthus ucarii (Caryophyllaceae): a new species from the northwest of Turkey. Turk J Bot 41(5): 486-492.
  • IUCN 2017. IUCN Red List Categories and Criteria, version 3.1, 2012. http://cmsdocs.s3.amazonaws.com/keydocuments/TranslatedVersions/2001redlistcats_crit_turkish.pdf. (Access date: 26.09.2017).
  • İlçim A, Behçet L, Mükemre M 2013. Dianthus vanensis (Caryophyllaceae), a new species from Turkey. Turk J Bot 37(2): 219-224.
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Mentjies P, Drummond A 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28(12): 1647-1649.
  • Kimura M 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16(2): 111-120.
  • Kumar S, Stecher G, Tamura K 2016. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. Molecular Biology and Evolution, 33(7): 1870-1874.
  • Popp M, Oxelman B 2001. Inferring the history of the polyploid Silene aegaea (Caryophyllaceae) using plastid and homoeologous nuclear DNA sequences. Molecular Phylogenetics and Evolution, 20(3): 474-481.
  • Popp M, Erixon P, Eggens F, Oxelman B 2005. Origin and Evolution of a Circumpolar Polyploid Species Complex in Silene (Caryophyllaceae) Inferred from Low Copy Nuclear RNA Polymerase Introns, rDNA, and Chloroplast DNA. Systematic Botany, 30(2): 302-313.
  • Reeve H 1967. Dianthus L. (Flora of Turkey and the East Aegean Islands, vol 2. Edinburgh University Press, Edinburgh: Ed. Davis PH) 99-131.
  • Rettig JH, Wilson HD, Manhart JR 1992. Phylogeny of the Caryophyllales - gene sequence data. Taxon, 41(2): 201-209.
  • Tamura K, Peterson D, Peterson N, Nei M, Kumar S 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28(10): 2731-2739.
  • Vural, C 2008. A new species of Dianthus (Caryophyllaceae) from mount Erciyes, Central Anatolia, Turkey. Botanical Journal of the Linnean Society 158(1): 55-61.
  • White TJ, Bruns T, Lee S, Taylor J 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Chapter 38. (PCR Protocols: A Guide to Methods and Applications, Academic Press, Orlando, Florida: Eds. Innis MD, Sninsky GJ, White T) 315-322.
  • Yılmaz O, Kaynak G, Daşkın R, Meriçlioğlu A 2011. Dianthus goekayi (Cary.ophyllaceae), a new species from Turkey. Annales Botanici Fennici, 48(1): 74-78.
There are 25 citations in total.

Details

Primary Language English
Journal Section RESEARCH ARTICLE
Authors

Ergin Hamzaoğlu

Murat Koç

İlker Büyük

Publication Date August 31, 2018
Submission Date October 28, 2017
Acceptance Date February 5, 2018
Published in Issue Year 2018Volume: 21 Issue: 4

Cite

APA Hamzaoğlu, E., Koç, M., & Büyük, İ. (2018). Two New Spiny Species of Dianthus (Caryophyllaceae) from Turkey. Kahramanmaraş Sütçü İmam Üniversitesi Tarım Ve Doğa Dergisi, 21(4), 545-554. https://doi.org/10.18016/ksudobil.347445

Cited By

Dianthus pseudarmeria (Caryophyllaceae) Türünün Türkiye’den Yeni Bir Alttürü
Commagene Journal of Biology
https://doi.org/10.31594/commagene.1086704
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