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Initial Report of Inocybe costinitii in Türkiye with Morphological and Molecular Data

Year 2024, Volume: 27 Issue: 6, 1304 - 1312

Ilgaz Akata , Gülce Ediş , Eda Kumru , İsmail Acar , Ergin Sahin

https://doi.org/10.18016/ksutarimdoga.vi.1467628

Abstract

Inocybe specimens were collected from Ankara University Beşevler 10. Yıl Campus, (Ankara, Türkiye) on October 19, 2022. As a result, the samples were identified as I. costinitii, a new record for Turkish Inocybe. This study presents a detailed description of this newly recorded species, covering aspects such as its location, observations of its habitat, geographical coordinates, the date of collection, and photographs that highlight its macroscopic and microscopic characteristics. Moreover, the study features the species' drawings and some of its microscopic traits. The study is enhanced by images obtained from a scanning electron microscope (SEM), briefly examining the spore features and discussed briefly.

Keywords

Inocybe costinitii Inocybaceae New record Türkiye

Ethical Statement

No need for an ethics committee document

Supporting Institution

This study was not financially supported by any organization or project

Thanks

The authors extend their sincere gratitude to Dr. Elif Akhüseyin for her invaluable assistance with scanning electron microscopy. We also wish to express our appreciation to Deniz Sarel for his significant contributions to editing the microscopic photographs.

References

  • Akata, I., & Erdoğdu, M. (2020). First report of Rutstroemia elatina (Ascomycota) from Turkey. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 23(2), 391-395.
  • Akata, I., Kumru, E., Ediş G., Özbey, B.G. & Şahin. E. (2023). Three New Records For Turkish Agaricales Inhabiting Ankara University Beşevler 10th Year Campus Area. Kastamonu University Journal of Forestry Faculty, 23(3), 250-263.
  • Akata I., Kumru E., Şahin E., Acar İ. & Kaya E. (2024). Amanita vidua: A new record for Turkish Amanita Section Phalloideae based on morphological and molecular data. Trakya Univ J Nat Sci, 25(1), 97-110.
  • Altuntaş, D., Sesli, E., Büyük, I. & Akata, I. (2019). Inocybe mytiliodora: A new record for Türkiye. Kastamonu University Journal of Forestry Faculty, 19(3), 284-289.
  • Altuntaş, D., Sahin, E., Kabaktepe, Ş., Alli, H., & Akata, I. (2021). Albatrellopsis flettii, A New Genus for Turkish Albatrellaceae. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 24(4), 815-819.
  • Bandini, D. & Huijser, H. (2017). Vezelkoppen (Inocybe) van Ameland, Inocybe griseotarda Poirier. Coolia, 60(4), 243-247.
  • Bandini, D., Vauras, J., Weholt, Ø., Oertel, B. & Eberhardt, U. (2020). Inocybe woglindeana, a new species of the genus Inocybe, thriving in exposed habitats with calcareous sandy soil. Karstenia, 58(1), 41-59.
  • Bandini, D., Oerte, l.B. & Eberhardt, U. (2021). A fresh outlook on the smooth-spored species of Inocybe: type studies and 18 new species. Mycological Progress 20, 1019-1114.
  • Bandini, D., Brandrud, T.E., Dima, B., Dondl, M., Fachada, V., Hussong, A., Mifsud, S., Oertel, B., Rodríguez Campo, F.J., Thüs, H., Vauras, J., Weholt, Ø. & Eberhardt, U. (2022). Fibre caps across Europe: type studies and 11 new species of Inocybe (Agaricales, Basidiomycota). Integrative Systematics: Stuttgart Contributions to Natural History, 5(2), 1-85.
  • Bizio, E., Ferisin, G. & Dovana, F. (2016). Inocybe costinitii a new species from the Istrian coast. Micologia e Vegetazione Mediterrane, 31(2), 95-102.
  • Bizio, E., Ferisin, G. & Dovana, F. (2017). Note sul campo di variabilità di Inocybe griseotarda. Rivista di Micologia, 60(1), 59-70.
  • Chen, L., Cai, Y., Zhou, G., Shi, X., Su, J., Chen, G. & Lin, K. (2014). Rapid Sanger sequencing of the 16S rRNA gene for identification of some common pathogens. PloS One 9(2): e88886.
  • Dovana, F., Bandini, D., Eberhardt, U., Olariaga, I., Bizio, E., Ferisin, G. & Esteve-Raventós, F. (2023). Re Valuation of the Taxonomic Status of Species within the Inocybe similis Complex. Journal of Fungi, 9(6), 679.
  • Fachada, V., Bandini, D. & Beja-Pereira, A. (2024). Two new species of Inocybe from Mediterranean Cistaceae heathlands. Mycologia, 1-16.
  • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39(4), 783-791.
  • Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018). MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35(6), 1547-1549.
  • Kuyper, T. (1985). Studies in Inocybe-I. Revision of the new taxa of Inocybe described by Velenovský. Persoonia-Molecular Phylogeny and Evolution of Fungi, 12(4), 375-400.
  • Kuyper, T.W. (1986). A revision of the genus Inocybe in Europe. I. Subgenus Inosperma and the smooth-spored species of subgenus Inocybe. Persoonia-Supplement, 3(1), 1-247.
  • Marian, I.M., Valdes, I.D., Hayes, R.D., La Butti, K., Duffy, K., Chovatia, M., Johnson J., Ng, V., Lugones L.G., Wösten, H.A.B., Grigoriev, I.V. & Ohm, R.A. (2024). High phenotypic and genotypic plasticity among strains of the mushroom-forming fungus Schizophyllum commune. BioRxiv, 2024-02.
  • Martin, K.J., & Rygiewicz, P.T. (2005). Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts. BMC Microbiology, 5, 1-11.
  • Matheny, P.B. & Kudzma, L.V. (2019). New species of Inocybe (Inocybaceae) from eastern North America1. The Journal of the Torrey Botanical Society, 146(3), 213-235.
  • Matheny, P. B., Hobbs, A. M., & Esteve-Raventós, F. (2020). Genera of Inocybaceae: New skin for the old ceremony. Mycologia, 112(1), 83-120.
  • Raja, H.A., Miller, A.N., Pearce, C.J. & Oberlies, N.H. (2017). Fungal identification using molecular tools: a primer for the natural products research community. Journal of Natural Products. 80(3), 756-770.
  • Rogers, S.O. & Bendich, A.J. (1994). Extraction of total cellular DNA from plants, algae, and fungi. Plant molecular biology manual, 183 -190.
  • Sesli, E. (2019). Inocybe griseotarda Poirier (Inocybaceae, Agaricales): Türkiye mikotası için yeni bir kayıt. Bağbahçe Bilim Dergisi,6(2), 95-98.
  • Tamura, K. (1992). Estimation of the number of nucleotide substitutions when there are strong transition -transversion and G + C -content biases. Molecular Biology and Evolution, 9, 678 -687.
  • White, T.J., Bruns, T., Lee, S. & Taylor, J.W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. pp. 315-322. In: Innis, M.A. & Gelfand, D.H. (eds). PCR Protocols: A Guide To Methods And Applications. Academic Press, London, 482 pp.

Morfolojik ve Moleküler Verilerle Inocybe costinitii'nin Türkiye'deki İlk Raporu

Year 2024, Volume: 27 Issue: 6, 1304 - 1312

Ilgaz Akata , Gülce Ediş , Eda Kumru , İsmail Acar , Ergin Sahin

https://doi.org/10.18016/ksutarimdoga.vi.1467628

Abstract

Inocybe örnekleri Ankara Üniversitesi Beşevler 10. Yıl Kampüsü’nden (Ankara, Türkiye) 19 Ekim 2022 tarihinde toplanmıştır. Sonuç olarak, bu örnekler Türkiye Inocybe cinsi için yeni bir kayıt olan I. costinitii olarak tanımlanmıştır. Bu çalışma, yeni kaydedilen bu türün konumu, yaşam alanı gözlemleri, coğrafi koordinatları, toplanma tarihi ve makroskobik ve mikroskobik özelliklerini vurgulayan fotoğraflar gibi hususları kapsayan ayrıntılı bir tanımını sunmaktadır. Araştırmada ayrıca türün bazı mikroskobik özelliklerinin çizimleri de yer almaktadır. Çalışma, spor özelliklerinin derinlemesine incelenmesini sağlayan taramalı elektron mikroskobundan (SEM) elde edilen görüntülerle zenginleştirilmiş ve kısaca tartışılmıştır.

Keywords

Inocybe costinitii Inocybaceae Türkiye Yeni kayıt

Ethical Statement

Çalışmada etik ihlali yoktur. Etik kurul belgesine ihtiyaç yoktur.

Supporting Institution

Bu çalışma hiçbir kurum tarafından destek görmemiştir.

Thanks

The authors extend their sincere gratitude to Dr. Elif Akhüseyin for her invaluable assistance with scanning electron microscopy. We also wish to express our appreciation to Deniz Sarel for his significant contributions to editing the microscopic photographs.

References

  • Akata, I., & Erdoğdu, M. (2020). First report of Rutstroemia elatina (Ascomycota) from Turkey. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 23(2), 391-395.
  • Akata, I., Kumru, E., Ediş G., Özbey, B.G. & Şahin. E. (2023). Three New Records For Turkish Agaricales Inhabiting Ankara University Beşevler 10th Year Campus Area. Kastamonu University Journal of Forestry Faculty, 23(3), 250-263.
  • Akata I., Kumru E., Şahin E., Acar İ. & Kaya E. (2024). Amanita vidua: A new record for Turkish Amanita Section Phalloideae based on morphological and molecular data. Trakya Univ J Nat Sci, 25(1), 97-110.
  • Altuntaş, D., Sesli, E., Büyük, I. & Akata, I. (2019). Inocybe mytiliodora: A new record for Türkiye. Kastamonu University Journal of Forestry Faculty, 19(3), 284-289.
  • Altuntaş, D., Sahin, E., Kabaktepe, Ş., Alli, H., & Akata, I. (2021). Albatrellopsis flettii, A New Genus for Turkish Albatrellaceae. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 24(4), 815-819.
  • Bandini, D. & Huijser, H. (2017). Vezelkoppen (Inocybe) van Ameland, Inocybe griseotarda Poirier. Coolia, 60(4), 243-247.
  • Bandini, D., Vauras, J., Weholt, Ø., Oertel, B. & Eberhardt, U. (2020). Inocybe woglindeana, a new species of the genus Inocybe, thriving in exposed habitats with calcareous sandy soil. Karstenia, 58(1), 41-59.
  • Bandini, D., Oerte, l.B. & Eberhardt, U. (2021). A fresh outlook on the smooth-spored species of Inocybe: type studies and 18 new species. Mycological Progress 20, 1019-1114.
  • Bandini, D., Brandrud, T.E., Dima, B., Dondl, M., Fachada, V., Hussong, A., Mifsud, S., Oertel, B., Rodríguez Campo, F.J., Thüs, H., Vauras, J., Weholt, Ø. & Eberhardt, U. (2022). Fibre caps across Europe: type studies and 11 new species of Inocybe (Agaricales, Basidiomycota). Integrative Systematics: Stuttgart Contributions to Natural History, 5(2), 1-85.
  • Bizio, E., Ferisin, G. & Dovana, F. (2016). Inocybe costinitii a new species from the Istrian coast. Micologia e Vegetazione Mediterrane, 31(2), 95-102.
  • Bizio, E., Ferisin, G. & Dovana, F. (2017). Note sul campo di variabilità di Inocybe griseotarda. Rivista di Micologia, 60(1), 59-70.
  • Chen, L., Cai, Y., Zhou, G., Shi, X., Su, J., Chen, G. & Lin, K. (2014). Rapid Sanger sequencing of the 16S rRNA gene for identification of some common pathogens. PloS One 9(2): e88886.
  • Dovana, F., Bandini, D., Eberhardt, U., Olariaga, I., Bizio, E., Ferisin, G. & Esteve-Raventós, F. (2023). Re Valuation of the Taxonomic Status of Species within the Inocybe similis Complex. Journal of Fungi, 9(6), 679.
  • Fachada, V., Bandini, D. & Beja-Pereira, A. (2024). Two new species of Inocybe from Mediterranean Cistaceae heathlands. Mycologia, 1-16.
  • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39(4), 783-791.
  • Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, K. (2018). MEGA X: Molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution, 35(6), 1547-1549.
  • Kuyper, T. (1985). Studies in Inocybe-I. Revision of the new taxa of Inocybe described by Velenovský. Persoonia-Molecular Phylogeny and Evolution of Fungi, 12(4), 375-400.
  • Kuyper, T.W. (1986). A revision of the genus Inocybe in Europe. I. Subgenus Inosperma and the smooth-spored species of subgenus Inocybe. Persoonia-Supplement, 3(1), 1-247.
  • Marian, I.M., Valdes, I.D., Hayes, R.D., La Butti, K., Duffy, K., Chovatia, M., Johnson J., Ng, V., Lugones L.G., Wösten, H.A.B., Grigoriev, I.V. & Ohm, R.A. (2024). High phenotypic and genotypic plasticity among strains of the mushroom-forming fungus Schizophyllum commune. BioRxiv, 2024-02.
  • Martin, K.J., & Rygiewicz, P.T. (2005). Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts. BMC Microbiology, 5, 1-11.
  • Matheny, P.B. & Kudzma, L.V. (2019). New species of Inocybe (Inocybaceae) from eastern North America1. The Journal of the Torrey Botanical Society, 146(3), 213-235.
  • Matheny, P. B., Hobbs, A. M., & Esteve-Raventós, F. (2020). Genera of Inocybaceae: New skin for the old ceremony. Mycologia, 112(1), 83-120.
  • Raja, H.A., Miller, A.N., Pearce, C.J. & Oberlies, N.H. (2017). Fungal identification using molecular tools: a primer for the natural products research community. Journal of Natural Products. 80(3), 756-770.
  • Rogers, S.O. & Bendich, A.J. (1994). Extraction of total cellular DNA from plants, algae, and fungi. Plant molecular biology manual, 183 -190.
  • Sesli, E. (2019). Inocybe griseotarda Poirier (Inocybaceae, Agaricales): Türkiye mikotası için yeni bir kayıt. Bağbahçe Bilim Dergisi,6(2), 95-98.
  • Tamura, K. (1992). Estimation of the number of nucleotide substitutions when there are strong transition -transversion and G + C -content biases. Molecular Biology and Evolution, 9, 678 -687.
  • White, T.J., Bruns, T., Lee, S. & Taylor, J.W. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. pp. 315-322. In: Innis, M.A. & Gelfand, D.H. (eds). PCR Protocols: A Guide To Methods And Applications. Academic Press, London, 482 pp.
There are 27 citations in total.

Details

Primary Language English
Subjects Botany (Other)
Journal Section RESEARCH ARTICLE
Authors

Ilgaz Akata 0000-0002-1731-1302

Gülce Ediş 0000-0001-7038-9865

Eda Kumru 0009-0000-7417-6197

İsmail Acar 0000-0002-6049-4896

Ergin Sahin 0000-0003-1711-738X

Early Pub Date August 15, 2024
Publication Date
Submission Date April 12, 2024
Acceptance Date June 11, 2024
Published in Issue Year 2024Volume: 27 Issue: 6

Cite

APA Akata, I., Ediş, G., Kumru, E., Acar, İ., et al. (2024). Initial Report of Inocybe costinitii in Türkiye with Morphological and Molecular Data. Kahramanmaraş Sütçü İmam Üniversitesi Tarım Ve Doğa Dergisi, 27(6), 1304-1312. https://doi.org/10.18016/ksutarimdoga.vi.1467628
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