Morphological and Molecular Phylogeny of Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Collected from Tokat Region

Meryem Şenay Şengül Demirak; Hakan Işık; İbrahim Türkekul

doi:10.18016/ksutarimdoga.vi.671275

Araştırma Makalesi

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Kaynak Göster

Tokat Yöresinden Toplanan Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Türünün Morfolojik ve Moleküler Filogenisi

Yıl 2020, Cilt: 23 Sayı: 3, 600 - 605, 30.06.2020

Meryem Şenay Şengül Demirak , Hakan Işık , İbrahim Türkekul

https://doi.org/10.18016/ksutarimdoga.vi.671275

Cited By: 3

Öz

Cortinarius (Pers.) Gray örnekleri Tokat ilinden meşe ormanlarında toplanmıştır. Makro ve mikromorfolojik özellikler ile nükleer ribozomal iç aralayıcı bölge (ITS) ve ribozomal en büyük alt birim (LSU) gen bölgelerine karşılık gelen DNA dizileri ile moleküler filogenetik analizler, çalışılan numunenin Cortinarius rufo-olivaceus (Pers.) Fr. türü olduğunu göstermiştir. Bu çalışma, Türkiye’de C. rufo-olivaceus’un mikroskobik ve makroskobik morfolojik tanımı ve moleküler filogenetik analizini belirleyen ilk çalışmadır.

Anahtar Kelimeler

Cortinarius , Makrofungus , Yeni lokalite , ITS , LSU

Proje Numarası

BAP project No: 2019/87

Kaynakça

Akata I, Kabaktepe S, Akgül H 2015. Cortinarius caperatus (Pers.) Fr., a new record for Turkish mycobiota. Kastamonu University Journal of Forestry Faculty 15: 86-89.
Bon M 1987. The Mushrooms and Toadstools of Britain and North-Western Europe. Hodder-Stoughton, London, 352 p.
Breitenbach J, Kränzlin F 2000. Fungi of Switzerland. Vol.5, Verlag Mykologia, Lucerne, Switzerland.
Frøslev TG, Jeppesen TS, Læssøe T, Kjøller R 2007. Molecular phylogenetics and delimitation of species in Cortinarius section Calochroi (Basidiomycota, Agaricales) in Europe. Molecular phylogenetics and evolution 44(1): 217-227.
Garnica S, Weiß M, Oertel B, Ammirati J, Oberwinkler F 2009. Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences. BMC Evolutionary Biology 9(1): 1.
Garrido-Benavent I, Ballarà J, Mahiques R 2015. New insights into subg. Phlegmacium sect. Calochroi: adding morphological and molecular data from Mediterranean representatives, with special regard to Cortinarius prasinus, C. natalis and C. murellensis species complexes. Journal des J.E.C., 17:38-78.
Işıloğlu M, Öder N 1995. Contributions to the macrofungi of Mediterranean Turkey. Turkish Journal of Botany, 19: 603-609.
Itoo ZA, Reshi ZA, Basharat Q, Majeed ST, Andrabi KI 2015. Identification and characterization of Ectomycorrhizal Cortinarius species (Agaricales, Basidiomycetes) from temperate Kashmir Himalaya, India, by ITS barcoding. Advances in Molecular Biology 2015: 1-9.
Kalmer A, Acar İ, Dizkırıcı Tekpınar A 2019. Phylogenetic and taxonomic studies on Cortinarius caerulescens (Schaeff.) Fr. a new record for Turkish mycota. The Journal of Fungus 10(1): 8-16.
Kirk P 2011. Index Fungorum. URL: http://www.indexfungorum.org (accessed 27.12.2019).
Kumar S, Stecher G, Tamura K 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular biology and evolution 33(7): 1870-1874.
Mazza G 2019. Monaco Nature Encyclopedia. Retrieved in December, 21, 2019 from https://www.monaconatureencyclopedia.com/cortinarius-rufoolivaceus/?lang=en
Moser M 1983. Keys to Agarics and Boleti. Gustav Fischer Verlag, Stuttgart, 535 p.
Ortega A, Suárez-Santiago VN, Reyes JD 2008. Morphological and ITS identification of Cortinarius species (section Calochroi) collected in Mediterranean Quercus woodlands. Fungal Diversity, 29: 73-88.
Orton PD 1955. The genus Cortinarius I. Myxacium and Phlegmacium. The Naturalist. 1-80, London, UK.
Phillips R 1981. Mushrooms and Other Fungi of Great Britain & Europe. Pan Books Ltd., London, 288p
Sesli E, Denchev CM 2014. Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey. 6 th. Mycotaxon Checklists Online: 1-136.
Sesli E, Contu M, Jordi VI, Moreau PA, Battistin E 2015. Taxonomic studies on some agaricoid and boletoid fungi of Turkey. Turkish Journal of Botany 39(1): 134-146.
Sesli E, Türkekul İ, Akata I, Niskanen T 2016. New records of Basidiomycota from Trabzon, Tokat, and İstanbul provinces in Turkey. Turkish Journal of Botany 40(5): 531-545.
Sesli E 2018. Cortinarius ve Lyophyllum cinslerine ait yeni kayıtlar. Mantar dergisi 9(1): 18-23.
Sesli E, Liimatainen K 2018. Cortinarius conicoumbonatus (Cortinarius subgen. Telamonia sect. Hinnulei): a new species from spruce-beech forests of the East Black Sea Region of Turkey. Turkish Journal of Botany 42(3): 327-334.
Stensrud Ø, Orr RJS, Røberg KR, Schumacher T, Høiland K 2014. Phylogenetic relationships in Cortinarius with focus on North European species. Karstenia, 54: 57-71.
Tamura K, Nei M 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular biology and evolution 10(3): 512-526.
Vilgalys R, Hester M 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172(8): 4238-4246.
White TJ, Bruns T, Lee SJ, Taylor J 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York, NY, USA: Academic Press, pp. 315-322.

Morphological and Molecular Phylogeny of Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Collected from Tokat Region

Yıl 2020, Cilt: 23 Sayı: 3, 600 - 605, 30.06.2020

Meryem Şenay Şengül Demirak , Hakan Işık , İbrahim Türkekul

https://doi.org/10.18016/ksutarimdoga.vi.671275

Cited By: 3

Öz

Cortinarius (Pers.) Gray samples were collected in the oak forests from Tokat province. Macro and micromorphological features as well as molecular phylogenetic analyses according to the DNA sequences corresponding to internal transcribed spacer region (ITS) and the large subunit (LSU) of nuclear ribosomal RNA gene regions indicated that the studied specimen is a Cortinarius rufo-olivaceus (Pers.) Fr. This study determined the first microscopic and macroscopic morphological description and molecular phylogenetic analysis of the Cortinarius rufo-olivaceus (Pers.) Fr. in Turkey.

Anahtar Kelimeler

Cortinarius , Macrofungi , New locality , ITS , LSU

Destekleyen Kurum

Tokat Gaziosmanpaşa University Scientific Research Project Foundation

Proje Numarası

BAP project No: 2019/87

Teşekkür

This study was supported by Tokat Gaziosmanpaşa University Scientific Research Project Foundation (BAP project No: 2019/87).

Kaynakça

Akata I, Kabaktepe S, Akgül H 2015. Cortinarius caperatus (Pers.) Fr., a new record for Turkish mycobiota. Kastamonu University Journal of Forestry Faculty 15: 86-89.
Bon M 1987. The Mushrooms and Toadstools of Britain and North-Western Europe. Hodder-Stoughton, London, 352 p.
Breitenbach J, Kränzlin F 2000. Fungi of Switzerland. Vol.5, Verlag Mykologia, Lucerne, Switzerland.
Frøslev TG, Jeppesen TS, Læssøe T, Kjøller R 2007. Molecular phylogenetics and delimitation of species in Cortinarius section Calochroi (Basidiomycota, Agaricales) in Europe. Molecular phylogenetics and evolution 44(1): 217-227.
Garnica S, Weiß M, Oertel B, Ammirati J, Oberwinkler F 2009. Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences. BMC Evolutionary Biology 9(1): 1.
Garrido-Benavent I, Ballarà J, Mahiques R 2015. New insights into subg. Phlegmacium sect. Calochroi: adding morphological and molecular data from Mediterranean representatives, with special regard to Cortinarius prasinus, C. natalis and C. murellensis species complexes. Journal des J.E.C., 17:38-78.
Işıloğlu M, Öder N 1995. Contributions to the macrofungi of Mediterranean Turkey. Turkish Journal of Botany, 19: 603-609.
Itoo ZA, Reshi ZA, Basharat Q, Majeed ST, Andrabi KI 2015. Identification and characterization of Ectomycorrhizal Cortinarius species (Agaricales, Basidiomycetes) from temperate Kashmir Himalaya, India, by ITS barcoding. Advances in Molecular Biology 2015: 1-9.
Kalmer A, Acar İ, Dizkırıcı Tekpınar A 2019. Phylogenetic and taxonomic studies on Cortinarius caerulescens (Schaeff.) Fr. a new record for Turkish mycota. The Journal of Fungus 10(1): 8-16.
Kirk P 2011. Index Fungorum. URL: http://www.indexfungorum.org (accessed 27.12.2019).
Kumar S, Stecher G, Tamura K 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular biology and evolution 33(7): 1870-1874.
Mazza G 2019. Monaco Nature Encyclopedia. Retrieved in December, 21, 2019 from https://www.monaconatureencyclopedia.com/cortinarius-rufoolivaceus/?lang=en
Moser M 1983. Keys to Agarics and Boleti. Gustav Fischer Verlag, Stuttgart, 535 p.
Ortega A, Suárez-Santiago VN, Reyes JD 2008. Morphological and ITS identification of Cortinarius species (section Calochroi) collected in Mediterranean Quercus woodlands. Fungal Diversity, 29: 73-88.
Orton PD 1955. The genus Cortinarius I. Myxacium and Phlegmacium. The Naturalist. 1-80, London, UK.
Phillips R 1981. Mushrooms and Other Fungi of Great Britain & Europe. Pan Books Ltd., London, 288p
Sesli E, Denchev CM 2014. Checklists of the myxomycetes, larger ascomycetes, and larger basidiomycetes in Turkey. 6 th. Mycotaxon Checklists Online: 1-136.
Sesli E, Contu M, Jordi VI, Moreau PA, Battistin E 2015. Taxonomic studies on some agaricoid and boletoid fungi of Turkey. Turkish Journal of Botany 39(1): 134-146.
Sesli E, Türkekul İ, Akata I, Niskanen T 2016. New records of Basidiomycota from Trabzon, Tokat, and İstanbul provinces in Turkey. Turkish Journal of Botany 40(5): 531-545.
Sesli E 2018. Cortinarius ve Lyophyllum cinslerine ait yeni kayıtlar. Mantar dergisi 9(1): 18-23.
Sesli E, Liimatainen K 2018. Cortinarius conicoumbonatus (Cortinarius subgen. Telamonia sect. Hinnulei): a new species from spruce-beech forests of the East Black Sea Region of Turkey. Turkish Journal of Botany 42(3): 327-334.
Stensrud Ø, Orr RJS, Røberg KR, Schumacher T, Høiland K 2014. Phylogenetic relationships in Cortinarius with focus on North European species. Karstenia, 54: 57-71.
Tamura K, Nei M 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular biology and evolution 10(3): 512-526.
Vilgalys R, Hester M 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172(8): 4238-4246.
White TJ, Bruns T, Lee SJ, Taylor J 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York, NY, USA: Academic Press, pp. 315-322.

Toplam 25 adet kaynakça vardır.

Ayrıntılar

Birincil Dil	İngilizce
Konular	Yapısal Biyoloji
Bölüm	ARAŞTIRMA MAKALESİ (Research Article)
Yazarlar	Meryem Şenay Şengül Demirak 0000-0003-4879-1908 Hakan Işık 0000-0001-8241-0078 İbrahim Türkekul 0000-0002-1036-9835
Proje Numarası	BAP project No: 2019/87
Yayımlanma Tarihi	30 Haziran 2020
Gönderilme Tarihi	6 Ocak 2020
Kabul Tarihi	20 Şubat 2020
Yayımlandığı Sayı	Yıl 2020 Cilt: 23 Sayı: 3

Kaynak Göster

APA	Şengül Demirak, M. Ş., Işık, H., & Türkekul, İ. (2020). Morphological and Molecular Phylogeny of Cortinarius rufo-olivaceus (Pers.) Fr. (subgenus Phlegmacium sect. Calochroi) Collected from Tokat Region. Kahramanmaraş Sütçü İmam Üniversitesi Tarım ve Doğa Dergisi, 23(3), 600-605. https://doi.org/10.18016/ksutarimdoga.vi.671275